mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-22 19:18:17 +00:00
940d7fe9d6
* Move MetaPhlAn3 to a subcommand and add mergemetaphlantables * Add mergemetaphlantables tests * Add mergemetaphlantables to test config * Apply suggestions from code review * Revert now unnecessary input channel name change and now document * Update modules/metaphlan3/mergemetaphlantables/main.nf * Require database directory and more details in description
9 lines
252 B
Text
9 lines
252 B
Text
process {
|
|
|
|
publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" }
|
|
|
|
withName: METAPHLAN3 {
|
|
ext.args = '--index mpa_v30_CHOCOPhlAn_201901 --add_viruses --bt2_ps very-sensitive-local'
|
|
}
|
|
|
|
}
|