mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-23 03:28:17 +00:00
e50a525715
* new module gatk4/markduplicates * add tests * add gatk4_markduplicates entry in pytest_software.yml * Update software/gatk4/markduplicates/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> * Update software/gatk4/markduplicates/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> * Update software/gatk4/markduplicates/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> * Update software/gatk4/markduplicates/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> * Update tests/software/gatk4/markduplicates/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> * Update tests/software/gatk4/markduplicates/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> * Apply suggestions from code review * Fix EC lint * Update md5sum Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> |
||
|---|---|---|
| .. | ||
| applybqsr | ||
| baserecalibrator | ||
| bedtointervallist | ||
| createsequencedictionary | ||
| fastqtosam | ||
| haplotypecaller | ||
| markduplicates | ||
| mergebamalignment | ||
| mergevcfs | ||
| revertsam | ||
| samtofastq | ||
| splitncigarreads | ||
| variantfiltration | ||