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a6cb75174b
* Add optional variant catalog input * fix for no variant catalog test Co-authored-by: ljmesi <37740329+ljmesi@users.noreply.github.com> Co-authored-by: Lauri Mesilaakso <john.mesilaakso@gmail.com>
27 lines
1.1 KiB
YAML
27 lines
1.1 KiB
YAML
- name: stranger test_stranger
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command: nextflow run tests/modules/stranger -entry test_stranger -c tests/config/nextflow.config
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tags:
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- stranger
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files:
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- path: output/expansionhunter/test.vcf
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md5sum: cfd4a1d35c0e469b99eb6aaa6d22de76
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- path: output/expansionhunter/versions.yml
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md5sum: f3962a6eecfddf9682414c0f605a885a
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- path: output/stranger/test.vcf.gz
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md5sum: 68b0ca1319851134ffa8793a4704dc11
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- path: output/stranger/versions.yml
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md5sum: 5ec35fd835fb1be50bc3e7c004310fc0
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- name: stranger test_stranger_without_optional_variant_catalog
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command: nextflow run tests/modules/stranger -entry test_stranger_without_optional_variant_catalog -c tests/config/nextflow.config
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tags:
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- stranger
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files:
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- path: output/expansionhunter/test.vcf
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md5sum: cfd4a1d35c0e469b99eb6aaa6d22de76
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- path: output/expansionhunter/versions.yml
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md5sum: c95af9e6d8cd9bd2ce1090ca4e7a6020
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- path: output/stranger/test.vcf.gz
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md5sum: bbe15159195681d5c18596d3ad85c78f
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- path: output/stranger/versions.yml
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md5sum: 8558542a007e90ea5dcdceed3f12585d
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