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https://github.com/MillironX/nf-core_modules.git
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e745e167c1
* fix yml formatting * allow fastq.gz and fq.gz as file input, add meta.yml and test * fix yaml files * Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test" This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4. * prettier magic! * fix comments for yamllint * remove node version number * fix linting errors Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
31 lines
987 B
YAML
31 lines
987 B
YAML
- name: raxmlng no_bootstrap
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command: nextflow run ./tests/modules/raxmlng -entry test_raxmlng_no_bootstrap -c ./tests/config/nextflow.config -c ./tests/modules/raxmlng/nextflow.config
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tags:
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- raxmlng
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files:
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- path: output/raxmlng/output.raxml.bestTree
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contains:
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- "sample1:0.359"
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- "sample2:1.50"
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- "sample3:0.000001"
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- "sample4:0.111"
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- name: raxmlng bootstrap
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command: nextflow run ./tests/modules/raxmlng -entry test_raxmlng_bootstrap -c ./tests/config/nextflow.config -c ./tests/modules/raxmlng/nextflow.config
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tags:
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- raxmlng
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files:
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- path: output/raxmlng/output.raxml.bestTree
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contains:
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- "sample1:0.359"
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- "sample2:1.50"
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- "sample3:0.000001"
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- "sample4:0.111"
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- path: output/raxmlng/output.raxml.support
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contains:
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- "sample1:0.359"
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- "sample2:1.50"
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- "sample3:0.000001"
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- "sample4:0.111"
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contains_regex:
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- '\)[89]\d:'
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