mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-09-21 15:52:05 +00:00
bb90e4fb78
* Remove customisation from bcftools modules * Add save_mpileup option to bcftools/mpileup * Remove params.save_mpileup from ivar/consensus * Update meta.ymls
27 lines
1.2 KiB
YAML
27 lines
1.2 KiB
YAML
- name: bcftools mpileup test_bcftools_mpileup
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command: nextflow run ./tests/modules/bcftools/mpileup -entry test_bcftools_mpileup -c ./tests/config/nextflow.config -c ./tests/modules/bcftools/mpileup/nextflow.config
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tags:
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- bcftools/mpileup
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- bcftools
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files:
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- path: output/bcftools/test.bcftools_stats.txt
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md5sum: 72c506e633413c6b439f95336933984e
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- path: output/bcftools/test.vcf.gz.tbi
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md5sum: ae0f17dcc2cb27034d848699b824c516
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- path: output/bcftools/test.vcf.gz
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md5sum: e9e520663875c66296f3bff0fa226c40
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- name: bcftools mpileup test_bcftools_save_mpileup
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command: nextflow run ./tests/modules/bcftools/mpileup -entry test_bcftools_save_mpileup -c ./tests/config/nextflow.config -c ./tests/modules/bcftools/mpileup/nextflow.config
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tags:
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- bcftools/mpileup
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- bcftools
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files:
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- path: output/bcftools/test.bcftools_stats.txt
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md5sum: 72c506e633413c6b439f95336933984e
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- path: output/bcftools/test.vcf.gz.tbi
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md5sum: ae0f17dcc2cb27034d848699b824c516
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- path: output/bcftools/test.vcf.gz
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md5sum: e9e520663875c66296f3bff0fa226c40
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- path: output/bcftools/test.mpileup
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md5sum: fe0e45a57ffdfb253ed6794f8356a3f0
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