nf-core_modules/tests/modules/gatk4
FriederikeHanssen 598d7abdb2
Log4j again (#1202)
* Log4j again

* Update checksums
2022-01-12 13:55:54 +01:00
..
applybqsr Log4j again (#1202) 2022-01-12 13:55:54 +01:00
applyvqsr Log4j again (#1202) 2022-01-12 13:55:54 +01:00
baserecalibrator Change intervals to be part of sample specific input (#1189) 2021-12-23 12:58:20 +01:00
bedtointervallist Update all modules to new NF DSL2 syntax (#1099) 2021-11-26 07:58:40 +00:00
calculatecontamination Log4j again (#1202) 2022-01-12 13:55:54 +01:00
createsequencedictionary Update all modules to new NF DSL2 syntax (#1099) 2021-11-26 07:58:40 +00:00
createsomaticpanelofnormals Change syntax from task.ext.suffix to tast.ext.prefix in all modules (#1110) 2021-12-02 12:39:55 +00:00
estimatelibrarycomplexity Update all modules to new NF DSL2 syntax (#1099) 2021-11-26 07:58:40 +00:00
fastqtosam Log4j again (#1202) 2022-01-12 13:55:54 +01:00
filtermutectcalls Update version for log4j vulnerability (#1176) 2021-12-20 17:10:49 +01:00
gatherbqsrreports Log4j again (#1202) 2022-01-12 13:55:54 +01:00
genomicsdbimport Log4j again (#1202) 2022-01-12 13:55:54 +01:00
genotypegvcfs Change intervals to be part of sample specific input (#1189) 2021-12-23 12:58:20 +01:00
getpileupsummaries Update version for log4j vulnerability (#1176) 2021-12-20 17:10:49 +01:00
haplotypecaller Change intervals to be part of sample specific input (#1189) 2021-12-23 12:58:20 +01:00
indexfeaturefile Log4j again (#1202) 2022-01-12 13:55:54 +01:00
intervallisttools Update all modules to new NF DSL2 syntax (#1099) 2021-11-26 07:58:40 +00:00
learnreadorientationmodel Change syntax from task.ext.suffix to tast.ext.prefix in all modules (#1110) 2021-12-02 12:39:55 +00:00
markduplicates Log4j again (#1202) 2022-01-12 13:55:54 +01:00
mergebamalignment Update all modules to new NF DSL2 syntax (#1099) 2021-11-26 07:58:40 +00:00
mergevcfs Update all modules to new NF DSL2 syntax (#1099) 2021-11-26 07:58:40 +00:00
mutect2 Update version for log4j vulnerability (#1176) 2021-12-20 17:10:49 +01:00
revertsam Update all modules to new NF DSL2 syntax (#1099) 2021-11-26 07:58:40 +00:00
samtofastq Update all modules to new NF DSL2 syntax (#1099) 2021-11-26 07:58:40 +00:00
splitncigarreads Log4j again (#1202) 2022-01-12 13:55:54 +01:00
variantfiltration Change syntax from task.ext.suffix to tast.ext.prefix in all modules (#1110) 2021-12-02 12:39:55 +00:00
variantrecalibrator add module: Variantrecalibrator (#1088) 2021-12-16 10:54:49 +00:00