nf-core_modules/tests/modules/metabat2/metabat2/test.yml
James A. Fellows Yates be85289981
Update metabat2 output channels and compression (#1111)
* feat: each output type has dedicated channel replace bgzip with gzip can only zip one at a time

* Add condition moving of unbinned files

* fix: solution for moving sometimes non-existant files

* fix: update meta.yml to add the new channels

* fix: remove most of the checksums due to variability

* fix: tweaking of output

* Update modules/metabat2/metabat2/main.nf

Co-authored-by: Maxime Borry <maxibor@users.noreply.github.com>

* Fix find commands

* Fix find commands

Co-authored-by: Maxime Borry <maxibor@users.noreply.github.com>
2021-12-09 15:00:32 +01:00

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YAML

- name: metabat2 metabat2 test_metabat2_no_depth
command: nextflow run tests/modules/metabat2/metabat2 -entry test_metabat2_no_depth -c tests/config/nextflow.config
tags:
- metabat2
- metabat2/metabat2
files:
- path: output/metabat2/bins/test.1.fa.gz
md5sum: 0e9bce5b5a0033fd4411a21dec881170
- path: output/metabat2/test.tsv.gz
- path: output/metabat2/versions.yml
md5sum: 5742a71af36c3a748fd5726d76924ba8
- name: metabat2 metabat2 test_metabat2_depth
command: nextflow run tests/modules/metabat2/metabat2 -entry test_metabat2_depth -c tests/config/nextflow.config
tags:
- metabat2
- metabat2/metabat2
files:
- path: output/metabat2/bins/test.1.fa.gz
md5sum: 0e9bce5b5a0033fd4411a21dec881170
- path: output/metabat2/test.tsv.gz
- path: output/metabat2/test.txt.gz
- path: output/metabat2/versions.yml
md5sum: 538c56b2df7d90580f05097218b5d5b1