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5e18e36895
* Fixes for PR 371 * Fix tags * Add md5sum * Add md5sums for stringtie * Fix tests for modules where subtool = build * Fix pytest_software name conflicts * Change _ to / in test.yml tags * Nope...that didnt work * Fix sequenzautils/bam2seqz tests
43 lines
2.1 KiB
YAML
43 lines
2.1 KiB
YAML
- name: stringtie forward-strand
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command: nextflow run ./tests/software/stringtie/ -entry test_stringtie_forward -c tests/config/nextflow.config
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tags:
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- stringtie
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files:
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- path: ./output/test_stringtie_forward/test.transcripts.gtf
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md5sum: 8abb6a87581bd7a61af74085b5a6daec
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- path: ./output/test_stringtie_forward/test.gene.abundance.txt
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md5sum: 7d8bce7f2a922e367cedccae7267c22e
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- path: ./output/test_stringtie_forward/test.coverage.gtf
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md5sum: d41d8cd98f00b204e9800998ecf8427e
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- path: ./output/test_stringtie_forward/test.ballgown/e_data.ctab
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md5sum: 6b4cf69bc03f3f69890f972a0e8b7471
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- path: ./output/test_stringtie_forward/test.ballgown/i_data.ctab
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md5sum: be3abe09740603213f83d50dcf81427f
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- path: ./output/test_stringtie_forward/test.ballgown/t_data.ctab
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md5sum: 3b66c065da73ae0dd41cc332eff6a818
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- path: ./output/test_stringtie_forward/test.ballgown/i2t.ctab
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md5sum: 8a117c8aa4334b4c2d4711932b006fb4
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- path: ./output/test_stringtie_forward/test.ballgown/e2t.ctab
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md5sum: e981c0038295ae54b63cedb1083f1540
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- name: stringtie reverse-strand
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command: nextflow run ./tests/software/stringtie/ -entry test_stringtie_reverse -c tests/config/nextflow.config
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tags:
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- stringtie
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files:
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- path: ./output/test_stringtie_reverse/test.transcripts.gtf
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md5sum: 8bdcda06f39183fa4312644bd0e41bb5
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- path: ./output/test_stringtie_reverse/test.gene.abundance.txt
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md5sum: 7385b870b955dae2c2ab78a70cf05cce
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- path: ./output/test_stringtie_reverse/test.coverage.gtf
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md5sum: d41d8cd98f00b204e9800998ecf8427e
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- path: ./output/test_stringtie_reverse/test.ballgown/e_data.ctab
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md5sum: 879b6696029d19c4737b562e9d149218
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- path: ./output/test_stringtie_reverse/test.ballgown/i_data.ctab
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md5sum: be3abe09740603213f83d50dcf81427f
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- path: ./output/test_stringtie_reverse/test.ballgown/t_data.ctab
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md5sum: 3b66c065da73ae0dd41cc332eff6a818
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- path: ./output/test_stringtie_reverse/test.ballgown/i2t.ctab
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md5sum: 8a117c8aa4334b4c2d4711932b006fb4
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- path: ./output/test_stringtie_reverse/test.ballgown/e2t.ctab
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md5sum: e981c0038295ae54b63cedb1083f1540
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