GCJMackenzie aa32a8a72e new module: gatk4/calculatecontamination (#778) ... * initiated files for calculate contamination * pushing local repo to remote * created script, filled in meta yml, created tests and test yml. local checks passing, needs repo side test data * added option and tests for outputting optional segmentation file * saving for test push * versions updated, test data added * Update main.nf * fixed versions info, should report correctly now * small update to main.nf outputs formatting * Apply suggestions from code review * Update test_data.config * Apply suggestions from code review Co-authored-by: GCJMackenzie <gavin.mackenzie@nibsc.org> Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>		2021-10-05 22:52:00 +01:00
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config	new module: gatk4/calculatecontamination (#778)	2021-10-05 22:52:00 +01:00
modules	new module: gatk4/calculatecontamination (#778)	2021-10-05 22:52:00 +01:00
test_versions_yml.py	Better error message for FileNotFoundErrors (#755)	2021-09-28 16:51:35 +02:00