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c363d8c37c
* added gvcftools/extractvariants * linting * Update modules/gvcftools/extractvariants/meta.yml Co-authored-by: Júlia Mir Pedrol <mirp.julia@gmail.com> * Update modules/gvcftools/extractvariants/main.nf Co-authored-by: Júlia Mir Pedrol <mirp.julia@gmail.com> * added uncompressed input handling Co-authored-by: Júlia Mir Pedrol <mirp.julia@gmail.com>
15 lines
769 B
YAML
15 lines
769 B
YAML
- name: gvcftools extractvariants test_gvcftools_extractvariants
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command: nextflow run ./tests/modules/gvcftools/extractvariants -entry test_gvcftools_extractvariants -c ./tests/config/nextflow.config -c ./tests/modules/gvcftools/extractvariants/nextflow.config
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tags:
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- gvcftools
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- gvcftools/extractvariants
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files:
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- path: output/gvcftools/test.vcf.gz
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- name: gvcftools extractvariants test_gvcftools_extractvariants_uncompressed
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command: nextflow run ./tests/modules/gvcftools/extractvariants -entry test_gvcftools_extractvariants_uncompressed -c ./tests/config/nextflow.config -c ./tests/modules/gvcftools/extractvariants/nextflow.config
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tags:
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- gvcftools
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- gvcftools/extractvariants
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files:
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- path: output/gvcftools/test.vcf.gz
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