nf-core_modules/tests/modules/gatk4/revertsam/test.yml at ac1e6df076195cec553a2079c9cebd94026a0d47 - millironx/nf-core_modules - Milliron X Code: Code hosting for cattle or technology, but especially anything to do with both of them

millironx/nf-core_modules

mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-09-21 15:52:05 +00:00

Harshil Patel e937c7950a

Rename software/ directory to modules/ to re-organise module structure (#567 )

* Update README

* Rename pytest_software.yml to pytest_modules.yml

* Rename main software directory to modules

* Remove deprecated modules

* Rename tests software to modules

* Replace paths for tests in pytest_modules.yml

* Replace software with modules in Github Actions

* Replace software with modules in main.nf tests

* Rename software to modules in test.yml

2021-07-07 10:10:18 +01:00

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YAML

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 - name: gatk4 revertsam test_gatk4_revertsam
   command: nextflow run tests/modules/gatk4/revertsam -entry test_gatk4_revertsam -c tests/config/nextflow.config
   tags:
     - gatk4
     - gatk4/revertsam
   files:
     - path: output/gatk4/test.reverted.bam
       md5sum: f778310b18b83b49929eb648594f96dc