mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-11 04:33:10 +00:00
acb1a12a56
* Re-organise all test data * Fix ECLint * Fix ECLint agaaainn * Now is not the time EClint
13 lines
444 B
Text
13 lines
444 B
Text
#!/usr/bin/env nextflow
|
|
|
|
nextflow.enable.dsl = 2
|
|
|
|
include { BISMARK_DEDUPLICATE } from '../../../../software/bismark/deduplicate/main.nf' addParams( options: [:] )
|
|
|
|
workflow test_bismark_deduplicate {
|
|
input = [ [ id:'test', single_end:false ], // meta map
|
|
[ file("${launchDir}/tests/data/genomics/sarscov2/illumina/bam/test_methylated_paired_end.bam", checkIfExists: true) ]
|
|
]
|
|
|
|
BISMARK_DEDUPLICATE ( input )
|
|
}
|