nf-core_modules/tests/software/salmon/index/main.nf
Harshil Patel acb1a12a56
Re-organise all test data (#354)
* Re-organise all test data

* Fix ECLint

* Fix ECLint agaaainn

* Now is not the time EClint
2021-03-24 09:53:41 +00:00

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#!/usr/bin/env nextflow
nextflow.enable.dsl = 2
include { SALMON_INDEX } from '../../../../software/salmon/index/main.nf' addParams( options: [:] )
workflow test_salmon_index {
genome = file("${launchDir}/tests/data/genomics/sarscov2/genome/genome.fasta", checkIfExists: true)
transcriptome = file("${launchDir}/tests/data/genomics/sarscov2/genome/transcriptome.fasta", checkIfExists: true)
SALMON_INDEX ( genome, transcriptome )
}