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3aacd46da2
* backfilled modules with meta.yml that had no license identifier * harmonized BSD license names * whitespace linting at modules/unzip/meta.yml:12 * harmonized software from US NIH-NCBI/NIST to 'US-Government-Work' * Update modules/bcftools/index/meta.yml `bcftools` is dual-licensed, use associative array to allow for multiple licenses Co-authored-by: Michael L Heuer <heuermh@acm.org> Co-authored-by: Michael L Heuer <heuermh@acm.org>
39 lines
1.1 KiB
YAML
39 lines
1.1 KiB
YAML
name: cat_fastq
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description: Concatenates fastq files
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keywords:
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- fastq
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- concatenate
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tools:
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- cat:
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description: |
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The cat utility reads files sequentially, writing them to the standard output.
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documentation: https://www.gnu.org/software/coreutils/manual/html_node/cat-invocation.html
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licence: ['GPL-3.0-or-later']
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input:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- reads:
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type: list
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description: |
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List of input FastQ files to be concatenated.
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output:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- reads:
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type: file
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description: Merged fastq file
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pattern: "*.{merged.fastq.gz}"
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- versions:
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type: file
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description: File containing software versions
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pattern: "versions.yml"
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authors:
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- "@joseespinosa"
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- "@drpatelh"
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