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3aacd46da2
* backfilled modules with meta.yml that had no license identifier * harmonized BSD license names * whitespace linting at modules/unzip/meta.yml:12 * harmonized software from US NIH-NCBI/NIST to 'US-Government-Work' * Update modules/bcftools/index/meta.yml `bcftools` is dual-licensed, use associative array to allow for multiple licenses Co-authored-by: Michael L Heuer <heuermh@acm.org> Co-authored-by: Michael L Heuer <heuermh@acm.org>
47 lines
1.3 KiB
YAML
47 lines
1.3 KiB
YAML
name: nanolyse
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description: DNA contaminant removal using NanoLyse
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keywords:
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- contaminant_removal
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tools:
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- nanolyse:
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description: |
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DNA contaminant removal using NanoLyse
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homepage: https://github.com/wdecoster/nanolyse
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documentation: https://github.com/wdecoster/nanolyse#nanolyse
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licence: ['GPL-3.0-or-later']
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input:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- fastq:
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type: file
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description: |
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Basecalled reads in FASTQ.GZ format
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pattern: "*.fastq.gz"
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- fasta:
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type: file
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description: |
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A reference fasta file against which to filter.
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pattern: "*.fasta"
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output:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- fastq:
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type: file
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description: Reads with contaminants removed in FASTQ format
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pattern: "*.fastq.gz"
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- log:
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type: file
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description: Log of the Nanolyse run.
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pattern: "*.log"
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- versions:
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type: file
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description: File containing software versions
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pattern: "versions.yml"
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authors:
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- "@yuukiiwa"
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