nf-core_modules/tools/fastqc/meta.yml
2020-07-11 13:42:13 +02:00

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YAML

name: FastQC
description: Run FastQC on sequenced reads
keywords:
- Quality Control
- QC
- Adapters
tools:
- fastqc:
description: |
FastQC gives general quality metrics about your reads.
It provides information about the quality score distribution
across your reads, the per base sequence content (%A/C/G/T).
You get information about adapter contamination and other
overrepresented sequences.
homepage: https://www.bioinformatics.babraham.ac.uk/projects/fastqc/
documentation: https://www.bioinformatics.babraham.ac.uk/projects/fastqc/Help/
input:
-
- name:
type: string
description: Sample identifier
- reads:
type: file
description: Input FastQ file, or pair of files
output:
-
- report:
type: file
description: FastQC report
pattern: *_fastqc.{zip,html}
authors:
-
- @ewels
- @FelixKrueger