mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-09-21 07:42:05 +00:00
17 lines
615 B
Text
17 lines
615 B
Text
#!/usr/bin/env nextflow
|
|
|
|
nextflow.enable.dsl = 2
|
|
|
|
include { MAXQUANT_LFQ } from '../../../../modules/maxquant/lfq/main.nf' addParams( options: [:] )
|
|
|
|
workflow test_maxquant_lfq {
|
|
|
|
input = [ [ id:'test' ], // meta map
|
|
file(params.fasta, checkIfExists: true), file(params.paramfile, checkIfExists: true)
|
|
]
|
|
|
|
|
|
rawfiles = [file('https://github.com/wombat-p/MaxQuant-Workflow/raw/dev/Nextflow/data_test/OVEMB150205_12.raw') , file('https://github.com/wombat-p/MaxQuant-Workflow/raw/dev/Nextflow/data_test/OVEMB150205_14.raw') ]
|
|
|
|
MAXQUANT_LFQ ( input, rawfiles.collect() )
|
|
}
|