nf-core_modules/tests/modules/nucmer/test.yml at b3a672c8fa910cbf8a4e0b3cdbe70e6f36563211 - millironx/nf-core_modules - Milliron X Code: Code hosting for cattle or technology, but especially anything to do with both of them

millironx/nf-core_modules

mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-11-15 06:03:10 +00:00

Sateesh d5f6985607

add new nucmer module (#945 )

* add new nucmer module

* Apply suggestions from code review

Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com>

* update tests with file produced by input

* Update main.nf

* Update meta.yml

Co-authored-by: Michael Cipriano <mcipriano@gmail.com>
Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com>
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>

2021-11-15 22:05:34 +00:00

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 - name: nucmer test_nucmer
   command: nextflow run tests/modules/nucmer -entry test_nucmer -c tests/config/nextflow.config
   tags:
     - nucmer
   files:
     - path: output/nucmer/test.coords
       contains: ['MT192765.1']
     - path: output/nucmer/test.delta
       contains: ['MT192765.1']