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b012b349c1
* implement plink2 VCF import * fix yaml indentation Co-authored-by: Chris Cheshire <chris.j.cheshire@gmail.com>
13 lines
383 B
Text
13 lines
383 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { PLINK2_VCF } from '../../../../modules/plink2/vcf/main.nf' addParams( options: [args:'--allow-extra-chr'] )
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workflow test_plink2_vcf {
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input = [ [ id:'test', single_end:false ], // meta map
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file(params.test_data['sarscov2']['illumina']['test_vcf_gz'], checkIfExists: true) ]
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PLINK2_VCF ( input )
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}
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