nickhsmith 979e57b7ac Manta consistancy (#1407) ... * update tests * update * update * make the manta inputs consistant for germline/somatic/tumoronly * match chromosomes to cram file (chr21) * undo genotypegvfs * undo genotypegvfs * update manta input structure to match strelka. tuple(relevant input), path(fasta), path(fai) * update tests * fix typos * fix typos Co-authored-by: Smith Nicholas <smith@in.tum.de>		2022-03-18 13:30:03 +01:00
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main.nf	Manta consistancy (#1407)	2022-03-18 13:30:03 +01:00
nextflow.config
test.yml