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https://github.com/MillironX/nf-core_modules.git
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5b1fe84bc6
* add new assembly scan module * add newline endings * fix newline ending * add newline at end Co-authored-by: Peri <rrx8@cdc.gov> Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com> Co-authored-by: Gregor Sturm <mail@gregor-sturm.de>
43 lines
1.1 KiB
YAML
43 lines
1.1 KiB
YAML
name: assemblyscan
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description: Assembly summary statistics in JSON format
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keywords:
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- assembly
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- statistics
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tools:
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- assemblyscan:
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description: Assembly summary statistics in JSON format
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homepage: https://github.com/rpetit3/assembly-scan
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documentation: https://github.com/rpetit3/assembly-scan
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tool_dev_url: https://github.com/rpetit3/assembly-scan
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doi: ""
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licence: ['MIT']
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input:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- assembly:
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type: file
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description: FASTA file for a given assembly
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pattern: "*.fasta"
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output:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- versions:
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type: file
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description: File containing software versions
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pattern: "versions.yml"
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- json:
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type: file
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description: Assembly statistics in JSON format
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pattern: "*.json"
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authors:
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- "@sateeshperi"
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- "@mjcipriano"
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