nf-core_modules/tests/modules/cooler/zoomify/test.yml at b50f4e3d59810447c10520c8dc9026c96d7c6470 - millironx/nf-core_modules - Milliron X Code: Code hosting for cattle or technology, but especially anything to do with both of them

millironx/nf-core_modules

mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-11-11 04:33:10 +00:00

JIANHONG OU 7ad42eae1b

Cooler zoomify (#514 )

* add software/cooler

* fix the wrong files uploaded.

* create a branch for cooler/zoomify

* Apply suggestions from code review

* update functions.nf to new version.

* update the test file to test-datasets.

* update the test method of zoomify

* update dump test file.

* update version.txt to version.yml

* Update modules/cooler/dump/main.nf

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>

* fix the output bug of versions update to pytest_modules.yml

* update the test file path and fix the output versions.

* Update modules/cooler/dump/main.nf

* indent

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
Co-authored-by: Gregor Sturm <mail@gregor-sturm.de>
Co-authored-by: Sébastien Guizard <sguizard@ed.ac.uk>
Co-authored-by: FriederikeHanssen <Friederike.hanssen@qbic.uni-tuebingen.de>

2021-11-15 17:18:02 +01:00

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 - name: cooler zoomify test_cooler_zoomify
   command: nextflow run tests/modules/cooler/zoomify -entry test_cooler_zoomify -c tests/config/nextflow.config
   tags:
     - cooler
     - cooler/zoomify
   files:
     - path: output/cooler/test.bedpe
       md5sum: 8d792beb609fff62b536c326661f9507