nf-core_modules/tests/modules/imputeme/vcftoprs/test.yml at b50f4e3d59810447c10520c8dc9026c96d7c6470 - millironx/nf-core_modules - Milliron X Code: Code hosting for cattle or technology, but especially anything to do with both of them

millironx/nf-core_modules

mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-11-10 20:23:10 +00:00

Lasse Folkersen e560fbbc3e

Imputeme (#882 )

* first commit with imputeme as a module. Extensive re-write of imputeme-code, resulting in release v1.0.7 that is runnable in the next-flow framework.


Co-authored-by: EC2 Default User <ec2-user@ip-172-31-21-198.us-west-2.compute.internal>
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
Co-authored-by: Pontus Freyhult <pontus_github@soua.net>

2021-11-05 10:25:54 +01:00

8 lines

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YAML

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 - name: imputeme vcftoprs test_imputeme_vcftoprs
   command: nextflow run tests/modules/imputeme/vcftoprs -entry test_imputeme_vcftoprs -c tests/config/nextflow.config
   tags:
     - imputeme
     - imputeme/vcftoprs
   files:
     - path: output/imputeme/output.json
       contains: [ 'type_2_diabetes_32541925":{"GRS":[24.01]' ]