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https://github.com/MillironX/nf-core_modules.git
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4398056204
* Add tests and yml file for macs2/callpeak * add format option for macs2 * update macs2/callpeak to accept format argument * update test.yml * update the container version. * try to fix the issue in conda container. * Update conda and containers * Going back to previous container versions Co-authored-by: JoseEspinosa <kadomu@gmail.com>
38 lines
1.4 KiB
YAML
38 lines
1.4 KiB
YAML
- name: macs2 callpeak test_macs2_callpeak_bed
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command: nextflow run tests/modules/macs2/callpeak -entry test_macs2_callpeak_bed -c tests/config/nextflow.config
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tags:
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- macs2
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- macs2/callpeak
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files:
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- path: output/macs2/test_peaks.narrowPeak
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md5sum: d41d8cd98f00b204e9800998ecf8427e
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- path: output/macs2/test_peaks.xls
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md5sum: 762383e3a35e1f9ac3834fd6b2926092
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- path: output/macs2/test_summits.bed
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md5sum: d41d8cd98f00b204e9800998ecf8427e
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- name: macs2 callpeak test_macs2_callpeak
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command: nextflow run tests/modules/macs2/callpeak -entry test_macs2_callpeak -c tests/config/nextflow.config
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tags:
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- macs2
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- macs2/callpeak
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files:
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- path: output/macs2/test_peaks.narrowPeak
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md5sum: 2e4da1c1704595e12aaf99cc715ad70c
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- path: output/macs2/test_peaks.xls
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md5sum: 5d65cb3dbd5421ea3bb5b490a100e9a4
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- path: output/macs2/test_summits.bed
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md5sum: 26f0f97b6c14dbca129e947a58067c82
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- name: macs2 callpeak test_macs2_callpeak_ctrl
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command: nextflow run tests/modules/macs2/callpeak -entry test_macs2_callpeak_ctrl -c tests/config/nextflow.config
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tags:
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- macs2
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- macs2/callpeak
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files:
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- path: output/macs2/test_peaks.narrowPeak
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md5sum: 653e1108cc57ca07d0f60fc0f4fb8ba3
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- path: output/macs2/test_peaks.xls
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md5sum: bf86546faa7b581b5209c29b22046a0a
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- path: output/macs2/test_summits.bed
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md5sum: 4f3c7c53a1d730d90d1b3dd9d3197af4
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