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fc4f3e8822
* add seqsero2 module * correct lint errors * Update modules/seqsero2/main.nf Co-authored-by: Sébastien Guizard <sguizard@ed.ac.uk> * set output directory Co-authored-by: Sébastien Guizard <sguizard@ed.ac.uk>
11 lines
468 B
YAML
11 lines
468 B
YAML
- name: seqsero2 test_seqsero2
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command: nextflow run tests/modules/seqsero2 -entry test_seqsero2 -c tests/config/nextflow.config
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tags:
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- seqsero2
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files:
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- path: output/seqsero2/results/SeqSero_log.txt
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md5sum: d00242dfa734b5abb3622a6048f0b4fb
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- path: output/seqsero2/results/SeqSero_result.tsv
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contains: ['Sample', 'Predicted', 'Note']
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- path: output/seqsero2/results/SeqSero_result.txt
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contains: ['Sample', 'Predicted', 'Note']
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