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19 lines
559 B
Text
19 lines
559 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { MULTIQC } from '../../../software/multiqc/main.nf' addParams(options: [publish_dir: 'test_multiqc'])
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include { test_paired_end } from '../fastqc/main.nf' addParams(options: [publish_dir: 'test_paired_end'])
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ch_multiqc_config = file("$launchDir/tests/software/multiqc/multiqc_config.yml", checkIfExists: true)
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workflow test_multiqc {
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test_paired_end()
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input = [
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ch_multiqc_config
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.mix(test_paired_end.out.zip.collect { it[1] }.ifEmpty([]))
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]
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MULTIQC(*input)
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}
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