nf-core_modules/tests/modules/angsd/docounts/test.yml
James A. Fellows Yates 1780cf9bcf
Add: ANGSD_DOCOUNTS (#2044)
* Update main.nf

* Update meta.yml

* Re-add logos as not staged in a way that works with MultiQC config files

* Add ANGSD doCounts

* Prettier

* Update main.nf

* Apply suggestions from code review

* Apply suggestions from code review

* Apply suggestions from code review

* Try loosening test due to conda

* Remove md5 for binary file

Co-authored-by: Simon Pearce <24893913+SPPearce@users.noreply.github.com>
2022-09-27 13:21:44 +02:00

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YAML

- name: angsd docounts test_angsd_docounts
command: nextflow run ./tests/modules/angsd/docounts -entry test_angsd_docounts -c ./tests/config/nextflow.config -c ./tests/modules/angsd/docounts/nextflow.config
tags:
- angsd/docounts
- angsd
files:
- path: output/angsd/test.counts.gz
contains: ["ind0TotDepth"]
- path: output/angsd/test.icnts.gz
- path: output/angsd/test.pos.gz
contains: ["chr pos totDepth"]