nf-core_modules/modules/graphmap2/index/meta.yml

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YAML

name: graphmap2_index
description: A versatile pairwise aligner for genomic and spliced nucleotide sequences
keywords:
- index
- fasta
- reference
tools:
- graphmap2:
description: |
A versatile pairwise aligner for genomic and spliced nucleotide sequences.
homepage: https://github.com/lbcb-sci/graphmap2
documentation: https://github.com/lbcb-sci/graphmap2#graphmap2---a-highly-sensitive-and-accurate-mapper-for-long-error-prone-reads
input:
- fasta:
type: file
description: |
Reference database in FASTA format.
output:
- gmidx:
type: file
description: Graphmap2 fasta index in gmidx format
pattern: "*.gmidx"
- versions:
type: file
description: File containing software versions
pattern: "versions.yml"
authors:
- "@yuukiiwa"
- "@drpatelh"