nf-core_modules/tests/modules/ensemblvep/nextflow.config
2022-07-13 13:43:03 +02:00

23 lines
541 B
Text

process {
publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" }
withName: ENSEMBLVEP {
container = 'nfcore/vep:106.1.WBcel235'
}
withName: ENSEMBLVEP_JSON {
container = 'nfcore/vep:106.1.WBcel235'
ext.args = '--json'
}
withName: ENSEMBLVEP_TAB {
container = 'nfcore/vep:106.1.WBcel235'
ext.args = '--tab'
}
withName: ENSEMBLVEP_VCF {
container = 'nfcore/vep:106.1.WBcel235'
ext.args = '--vcf'
}
}