nf-core_modules/tests/modules/atlas/pmd/test.yml
Merlin Szymanski b6fe5d2643
Add Atlas/PMD (#1810)
* add atlas/pmd
* update atlas/pmd tests
* Add atlas/PMD module
* Remove comment
* Run Prettier
* Incorporate Review by @jfy133

Co-authored-by: maxibor <maxime.borry@gmail.com>
Co-authored-by: Maxime Borry <maxibor@users.noreply.github.com>
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
2022-06-24 16:53:51 +02:00

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YAML

- name: atlas pmd test_atlas_pmd
command: nextflow run ./tests/modules/atlas/pmd -entry test_atlas_pmd -c ./tests/config/nextflow.config -c ./tests/modules/atlas/pmd/nextflow.config
tags:
- atlas/pmd
- atlas
files:
- path: output/atlas/test.paired_end.sorted_PMD_Table.txt
md5sum: b28a9f4784f30a711046708eb7d94642
- path: output/atlas/test.paired_end.sorted_PMD_Table_counts.txt
md5sum: 1aabfb83cfff6e0413f52d016c943e3e
- path: output/atlas/test.paired_end.sorted_PMD_input_Empiric.txt
md5sum: 8ff876f50ce05dc9aac0646a31682df0
- path: output/atlas/test.paired_end.sorted_PMD_input_Exponential.txt
md5sum: 2421450ef643316f4eacf5cb811e4df7