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b932210f27
* Fix version commands: round 3 * Fix seqkit/split2 modules * Fix flash and cat/fastq modules * Remove md5sums on gz files
15 lines
464 B
Text
15 lines
464 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { FLASH } from '../../../modules/flash/main.nf' addParams( options: [args:'-m 20 -M 100'] )
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workflow test_flash {
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input = [
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[ id:'test', single_end:false ], // meta map
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[ file(params.test_data['sarscov2']['illumina']['test_1_fastq_gz'], checkIfExists: true),
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file(params.test_data['sarscov2']['illumina']['test_2_fastq_gz'], checkIfExists: true) ]
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]
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FLASH ( input )
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}
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