Sébastien Guizard bcf2681b03 New module: pbbam/pbmerge (#752) ... * 👌 IMPROVE: Add some pacbio test files * 📦 NEW: Add pbbam/pbmerge module * 🐛 FIX: Add optional arguments to command line * 👌 IMPROVE: Update to last templates version * 👌 IMPROVE: Update module to last template version * 👌 IMPROVE: Update test data config and test script * 👌 IMPROVE: Remove useless index + Fix Typos * 👌 IMPROVE: Add some pacbio test files * 📦 NEW: Add pbbam/pbmerge module * 🐛 FIX: Add optional arguments to command line * 👌 IMPROVE: Update to last templates version * 👌 IMPROVE: Update module to last template version * 👌 IMPROVE: Update test data config and test script * 👌 IMPROVE: Remove useless index + Fix Typos * 👌 IMPROVE: Update and clean code * 🐛 FIX: Update module path in test * 🐛 FIX: Add missing () + correct module path in test * 👌 IMPROVE: Update pbmerge from version 1.6.0 to 1.7.0 * 👌 IMPROVE: Change output filename suffix for something more generic * 🐛 Update test.yml * Apply suggestions from code review * Update tests/modules/pbbam/pbmerge/test.yml * Update tests/modules/pbbam/pbmerge/main.nf Co-authored-by: Gregor Sturm <mail@gregor-sturm.de> Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com> Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>		2021-10-05 23:16:45 +01:00
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nextflow.config	Remove docker.runOptions in favor of docker.userEmulation. (#525)	2021-05-27 18:29:17 +01:00
pytest_modules.yml	New module: pbbam/pbmerge (#752)	2021-10-05 23:16:45 +01:00
test_data.config	new module: gatk4/calculatecontamination (#778)	2021-10-05 22:52:00 +01:00