nf-core_modules/tests/software/minimap2/index/test.yml at bdee7804ca9f28f7e46a3afa726fe64c6555893f - millironx/nf-core_modules - Milliron X Code: Code hosting for cattle or technology, but especially anything to do with both of them

millironx/nf-core_modules

mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-12-23 03:28:17 +00:00

Harshil Patel 466ab67808

Fixes for nanoseq modules (#479 )

* Fix minimap2 index module

* Fix minimap2 index tests

* Fix graphmap2 index module

* Fix graphmap2 module

* Fix ECLint

* Fix bedtools bamtobed module

* Fix tests for bedtools bamtobed module

* Add tag for graphmap2 align module

* Fix EClint

* Fix qcat module

* Add md5sum for graphmap2/align module

* Remove non-started test data file

* Remove md5sum for graphmap2 align

2021-04-30 15:57:43 +01:00

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 - name: minimap2 index
   command: nextflow run ./tests/software/minimap2/index -entry test_minimap2_index -c tests/config/nextflow.config
   tags:
     - minimap2
     - minimap2/index
   files:
     - path: ./output/minimap2/genome.mmi
       md5sum: 72e450f12dc691e763c697463bdb1571