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01d6d4c286
* Creation of Glimpse Chunk Add sub tools chunk with configuration and needed files for unitest. * Code linting correction * Prettier ran Newline deleted in nextflow.config * New final line and white spaces * Change Pytest.yml to work as a subtool. * Control for the parameters deleted. Control for the size/count of the window and buffer not needed. They have some defaults value. * Changed the different recommended part by @nvnieuwk Co-authored-by: nvnieuwk <101190534+nvnieuwk@users.noreply.github.com>
10 lines
304 B
Text
10 lines
304 B
Text
process {
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withName: glimpse_chunk {
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ext.args = [
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"--window-size 2000000",
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"--buffer-size 200000"
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].join(' ')
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ext.prefix = { "${meta.id}" }
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}
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publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" }
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}
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