nf-core_modules/modules/motus/merge/meta.yml
James A. Fellows Yates 54ff289487
Update mOTUs to remove now unused channel (#2075)
* Update main.nf

* Update meta.yml

* Re-add logos as not staged in a way that works with MultiQC config files

* Update main.nf

* Remove now unnecessary input channel

* Remove unused channel from tests
2022-09-16 10:23:21 +02:00

54 lines
1.5 KiB
YAML

name: "motus_merge"
description: Taxonomic meta-omics profiling using universal marker genes
keywords:
- classify
- metagenomics
- fastq
- taxonomic profiling
- merging
- merge
- otu table
tools:
- "motus":
description: "Marker gene-based OTU (mOTU) profiling"
homepage: "https://motu-tool.org/"
documentation: "https://github.com/motu-tool/mOTUs/wiki"
tool_dev_url: "https://github.com/motu-tool/mOTUs"
doi: "10.1038/s41467-019-08844-4"
licence: "['GPL v3']"
input:
- input:
type: file
description: |
List of output files (more than one) from motus profile,
or a single directory containing motus output files.
- db:
type: directory
description: |
mOTUs database downloaded by `motus downloadDB`
pattern: "db_mOTU/"
- profile_version_yml:
type: file
description: |
A single versions.yml file output from motus/profile. motus/merge cannot reconstruct
this itself without having the motus database present and configured with the tool
so here we take it from what is already reported by the upstream module.
pattern: "versions.yml"
output:
- versions:
type: file
description: File containing software versions
pattern: "versions.yml"
- txt:
type: file
description: OTU table in txt format, if BIOM format not requested
pattern: "*.txt"
- biom:
type: file
description: OTU table in biom format, if BIOM format requested
pattern: "*.biom"
authors:
- "@jfy133"