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e745e167c1
* fix yml formatting * allow fastq.gz and fq.gz as file input, add meta.yml and test * fix yaml files * Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test" This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4. * prettier magic! * fix comments for yamllint * remove node version number * fix linting errors Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
52 lines
1.3 KiB
YAML
52 lines
1.3 KiB
YAML
name: csvtk_split
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description: Splits CSV/TSV into multiple files according to column values
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keywords:
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- split
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- csv
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- tsv
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tools:
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- csvtk:
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description:
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CSVTK is a cross-platform, efficient and practical CSV/TSV toolkit
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that allows rapid data investigation and manipulation.
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homepage: https://bioinf.shenwei.me/csvtk/
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documentation: https://bioinf.shenwei.me/csvtk/
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tool_dev_url: https://github.com/shenwei356/csvtk
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doi: ""
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licence: ["MIT"]
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input:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- csv:
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type: file
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description: CSV/TSV file
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pattern: "*.{csv,tsv}"
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- in_format:
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type: string
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description: Input format (csv, tab, or a delimiting character)
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pattern: "*"
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- out_format:
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type: string
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description: Output format (csv, tab, or a delimiting character)
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pattern: "*"
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output:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- versions:
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type: file
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description: File containing software versions
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pattern: "versions.yml"
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- split_csv:
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type: file
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description: Split CSV/TSV file
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pattern: "*.{csv,tsv}"
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authors:
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- "@SusiJo"
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