nf-core_modules/tests/modules/mosdepth/nextflow.config
2022-05-25 19:19:39 +02:00

16 lines
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process {
publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" }
withName: MOSDEPTH_FAIL {
ext.args = "--by 100"
}
withName: MOSDEPTH_WINDOW {
ext.args = "--by 100"
}
withName: MOSDEPTH_QUANTIZED {
ext.args = "--quantize 0:1:4:100:200"
}
withName: MOSDEPTH_THRESHOLD {
ext.args = "--thresholds 1,10,20,30"
}
}