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* 👌 IMPROVE: Add some pacbio test files * 🐛 FIX: Add Pacbio index to test_data.config * 👌 IMPROVE: Re add 10000 data test * 👌 IMPROVE: Add some pbindex * 🐛 FIX: Add pbi extension to files * 📦 NEW: Add galgal6 chr30 test data * 📦 NEW: Add bamtools module * 👌 IMPROVE: Ignore test data * 👌 IMPROVE: Update to last templates version * 👌 IMPROVE: Update module to last template version * 👌 IMPROVE: Update module to last template version * 👌 IMPROVE: Final version of test datasets config * 👌 IMPROVE: Remove useless index + Fix Typos * 👌 IMPROVE: Add some pacbio test files * 🐛 FIX: Add Pacbio index to test_data.config * 👌 IMPROVE: Re add 10000 data test * 👌 IMPROVE: Add some pbindex * 🐛 FIX: Add pbi extension to files * 📦 NEW: Add galgal6 chr30 test data * 📦 NEW: Add bamtools module * 👌 IMPROVE: Ignore test data * 👌 IMPROVE: Update to last templates version * 👌 IMPROVE: Update module to last template version * 👌 IMPROVE: Update module to last template version * 👌 IMPROVE: Final version of test datasets config * 👌 IMPROVE: Remove useless index + Fix Typos * 👌 IMPROVE: Update with new versions.yml file * 🐛 FIX: Update meta.yml + correct typos * Update modules/bamtools/split/meta.yml Add bam, split, chunk tags Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * 🐛 FIX: Correct meta.yml * 🐛 FIX: Grab software name using ${getSoftwareName(task.process)} * 🐛 FIX: Update test.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
10 lines
435 B
YAML
10 lines
435 B
YAML
- name: bamtools split test_bamtools_split
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command: nextflow run tests/modules/bamtools/split -entry test_bamtools_split -c tests/config/nextflow.config
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tags:
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- bamtools/split
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- bamtools
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files:
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- path: output/bamtools/test.paired_end.sorted.REF_chr22.bam
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md5sum: b7dc50e0edf9c6bfc2e3b0e6d074dc07
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- path: output/bamtools/test.paired_end.sorted.REF_unmapped.bam
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md5sum: e0754bf72c51543b2d745d96537035fb
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