nf-core_modules/software
Edmund Miller c264c66a49
test(fastqc): Use -entry to speed up tests
`--wt, --workflow-threads` is now an option and can be used to run tests
simultaneously.
2020-11-16 13:41:59 -06:00
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bwa Remove Singularity image path 2020-11-12 14:55:16 +00:00
deeptools Remove Singularity image path 2020-11-12 14:55:16 +00:00
fastqc test(fastqc): Use -entry to speed up tests 2020-11-16 13:41:59 -06:00
gffread Remove Singularity image path 2020-11-12 14:55:16 +00:00
hisat2 Remove Singularity image path 2020-11-12 14:55:16 +00:00
homer/annotatepeaks Remove Singularity image path 2020-11-12 14:55:16 +00:00
lib Update functions script 2020-09-10 15:59:26 +01:00
macs2/callpeak Remove Singularity image path 2020-11-12 14:55:16 +00:00
phantompeakqualtools Remove Singularity image path 2020-11-12 14:55:16 +00:00
picard Remove Singularity image path 2020-11-12 14:55:16 +00:00
preseq/lcextrap Remove Singularity image path 2020-11-12 14:55:16 +00:00
qualimap/rnaseq Remove Singularity image path 2020-11-12 14:55:16 +00:00
rsem Remove Singularity image path 2020-11-12 14:55:16 +00:00
rseqc Remove Singularity image path 2020-11-12 14:55:16 +00:00
salmon Remove Singularity image path 2020-11-12 14:55:16 +00:00
samtools Remove Singularity image path 2020-11-12 14:55:16 +00:00
SOFTWARE/TOOL Remove Singularity image path 2020-11-12 14:55:16 +00:00
sortmerna Remove Singularity image path 2020-11-12 14:55:16 +00:00
star Remove Singularity image path 2020-11-12 14:55:16 +00:00
stringtie Remove Singularity image path 2020-11-12 14:55:16 +00:00
subread/featurecounts Remove Singularity image path 2020-11-12 14:55:16 +00:00
trimgalore Remove Singularity image path 2020-11-12 14:55:16 +00:00
ucsc/bedgraphtobigwig Remove Singularity image path 2020-11-12 14:55:16 +00:00
umitools Remove Singularity image path 2020-11-12 14:55:16 +00:00