nf-core_modules/tests/modules/samtools/ampliconclip/test.yml
FriederikeHanssen 897c33d5da
Samtools version update (#1507)
* Fix typo

* update version to 1.15.1

* Fix md5sums

* update mulled containers

* update md5sums

* update md5sums
2022-04-11 14:26:28 +02:00

32 lines
1.5 KiB
YAML

- name: samtools ampliconclip no stats no rejects
command: nextflow run ./tests/modules/samtools/ampliconclip -entry test_samtools_ampliconclip_no_stats_no_rejects -c ./tests/config/nextflow.config -c ./tests/modules/samtools/ampliconclip/nextflow.config
tags:
- samtools
- samtools/ampliconclip
files:
- path: output/samtools/test.bam
md5sum: d270363a7fb3d96be2df211099efc75b
- name: samtools ampliconclip no stats with rejects
command: nextflow run ./tests/modules/samtools/ampliconclip -entry test_samtools_ampliconclip_no_stats_with_rejects -c ./tests/config/nextflow.config -c ./tests/modules/samtools/ampliconclip/nextflow.config
tags:
- samtools
- samtools/ampliconclip
files:
- path: output/samtools/test.bam
md5sum: e7c4e64c259212e1670f6de96a5549b4
- path: output/samtools/test.cliprejects.bam
md5sum: b7c057b11950c2271a0c92236bee94b7
- name: samtools ampliconclip with stats with rejects
command: nextflow run ./tests/modules/samtools/ampliconclip -entry test_samtools_ampliconclip_with_stats_with_rejects -c ./tests/config/nextflow.config -c ./tests/modules/samtools/ampliconclip/nextflow.config
tags:
- samtools
- samtools/ampliconclip
files:
- path: output/samtools/test.bam
md5sum: e75992d4ff69cbaed9a089231be86b5e
- path: output/samtools/test.cliprejects.bam
md5sum: 729f03e7a2801d2c56c32bef8f3d6ead
- path: output/samtools/test.clipstats.txt
md5sum: fc23355e1743d47f2541f2cb1a7a0cda