mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-11 04:33:10 +00:00
c363d8c37c
* added gvcftools/extractvariants * linting * Update modules/gvcftools/extractvariants/meta.yml Co-authored-by: Júlia Mir Pedrol <mirp.julia@gmail.com> * Update modules/gvcftools/extractvariants/main.nf Co-authored-by: Júlia Mir Pedrol <mirp.julia@gmail.com> * added uncompressed input handling Co-authored-by: Júlia Mir Pedrol <mirp.julia@gmail.com>
15 lines
769 B
YAML
15 lines
769 B
YAML
- name: gvcftools extractvariants test_gvcftools_extractvariants
|
|
command: nextflow run ./tests/modules/gvcftools/extractvariants -entry test_gvcftools_extractvariants -c ./tests/config/nextflow.config -c ./tests/modules/gvcftools/extractvariants/nextflow.config
|
|
tags:
|
|
- gvcftools
|
|
- gvcftools/extractvariants
|
|
files:
|
|
- path: output/gvcftools/test.vcf.gz
|
|
|
|
- name: gvcftools extractvariants test_gvcftools_extractvariants_uncompressed
|
|
command: nextflow run ./tests/modules/gvcftools/extractvariants -entry test_gvcftools_extractvariants_uncompressed -c ./tests/config/nextflow.config -c ./tests/modules/gvcftools/extractvariants/nextflow.config
|
|
tags:
|
|
- gvcftools
|
|
- gvcftools/extractvariants
|
|
files:
|
|
- path: output/gvcftools/test.vcf.gz
|