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17 lines
615 B
Text
17 lines
615 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { MAXQUANT_LFQ } from '../../../../modules/maxquant/lfq/main.nf' addParams( options: [:] )
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workflow test_maxquant_lfq {
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input = [ [ id:'test' ], // meta map
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file(params.fasta, checkIfExists: true), file(params.paramfile, checkIfExists: true)
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]
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rawfiles = [file('https://github.com/wombat-p/MaxQuant-Workflow/raw/dev/Nextflow/data_test/OVEMB150205_12.raw') , file('https://github.com/wombat-p/MaxQuant-Workflow/raw/dev/Nextflow/data_test/OVEMB150205_14.raw') ]
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MAXQUANT_LFQ ( input, rawfiles.collect() )
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}
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