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e937c7950a
* Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml
31 lines
897 B
YAML
31 lines
897 B
YAML
- name: raxmlng no_bootstrap
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command: nextflow run ./tests/modules/raxmlng -entry test_raxmlng_no_bootstrap -c tests/config/nextflow.config
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tags:
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- raxmlng
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files:
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- path: output/raxmlng/output.raxml.bestTree
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contains:
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- 'sample1:0.359'
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- 'sample2:1.50'
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- 'sample3:0.000001'
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- 'sample4:0.111'
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- name: raxmlng bootstrap
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command: nextflow run ./tests/modules/raxmlng -entry test_raxmlng_bootstrap -c tests/config/nextflow.config
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tags:
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- raxmlng
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files:
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- path: output/raxmlng/output.raxml.bestTree
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contains:
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- 'sample1:0.359'
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- 'sample2:1.50'
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- 'sample3:0.000001'
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- 'sample4:0.111'
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- path: output/raxmlng/output.raxml.support
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contains:
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- 'sample1:0.359'
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- 'sample2:1.50'
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- 'sample3:0.000001'
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- 'sample4:0.111'
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contains_regex:
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- '\)[89]\d:'
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