mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-22 19:18:17 +00:00
e937c7950a
* Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml
16 lines
594 B
YAML
16 lines
594 B
YAML
- name: cutadapt single-end
|
|
command: nextflow run ./tests/modules/cutadapt -entry test_cutadapt_single_end -c tests/config/nextflow.config
|
|
tags:
|
|
- cutadapt
|
|
files:
|
|
- path: ./output/cutadapt/test.cutadapt.log
|
|
- path: ./output/cutadapt/test.trim.fastq.gz
|
|
|
|
- name: cutadapt paired-end
|
|
command: nextflow run ./tests/modules/cutadapt -entry test_cutadapt_paired_end -c tests/config/nextflow.config
|
|
tags:
|
|
- cutadapt
|
|
files:
|
|
- path: ./output/cutadapt/test.cutadapt.log
|
|
- path: ./output/cutadapt/test_1.trim.fastq.gz
|
|
- path: ./output/cutadapt/test_2.trim.fastq.gz
|