nf-core_modules/tests/modules/picard/markduplicates/test.yml
Harshil Patel c5235a983d
nf-core modules bump-versions for all modules (#630)
* Add blacklist of modules that shouldn't be updated to .nf-core.yml

* nf-core modules bump-versions for all modules

* Remove TODO statements identified by linting

* Fix md5sums for failing tests

* Fix more tests
2021-07-28 09:10:44 +01:00

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YAML

- name: picard markduplicates on sorted bam
command: nextflow run ./tests/modules/picard/markduplicates -entry test_picard_markduplicates_sorted_bam -c tests/config/nextflow.config
tags:
- picard
- picard/markduplicates
files:
- path: ./output/picard/test.MarkDuplicates.metrics.txt
- path: ./output/picard/test.bam
md5sum: 3270bb142039e86aaf2ab83c540225d5
- name: picard markduplicates on unsorted bam
command: nextflow run ./tests/modules/picard/markduplicates -entry test_picard_markduplicates_unsorted_bam -c tests/config/nextflow.config
tags:
- picard
- picard/markduplicates
exit_code: 1