| .. |
|
adapterremoval
|
Update restructured paths (#380)
|
2021-03-24 18:26:54 +00:00 |
|
allelecounter
|
Update test data paths. (#375)
|
2021-03-24 18:18:01 +00:00 |
|
bandage/image
|
Re-organise all test data (#354)
|
2021-03-24 09:53:41 +00:00 |
|
bcftools
|
update test data paths (#373)
|
2021-03-24 18:14:11 +00:00 |
|
bedtools
|
Update bedtools modules with config logic (#369)
|
2021-03-24 14:14:19 +00:00 |
|
bismark
|
Fixing vcftools and bismark tests (#383)
|
2021-03-25 09:12:08 +00:00 |
|
blast
|
Re-organise all test data (#354)
|
2021-03-24 09:53:41 +00:00 |
|
bowtie
|
Re-organise all test data (#354)
|
2021-03-24 09:53:41 +00:00 |
|
bowtie2
|
Fix some module test after adapting test config approach (#379)
|
2021-03-24 18:29:41 +00:00 |
|
bwa
|
Update test paths in bwa mappers (#387)
|
2021-03-25 09:24:21 +00:00 |
|
bwamem2
|
Update test paths in bwa mappers (#387)
|
2021-03-25 09:24:21 +00:00 |
|
bwameth
|
Fix some module test after adapting test config approach (#379)
|
2021-03-24 18:29:41 +00:00 |
|
cat/fastq
|
Fix some module tests after switching to config data (#386)
|
2021-03-24 18:28:07 +00:00 |
|
cnvkit
|
Update test data paths. (#375)
|
2021-03-24 18:18:01 +00:00 |
|
cutadapt
|
Update test data paths. (#375)
|
2021-03-24 18:18:01 +00:00 |
|
dsh
|
Update restructured paths (#380)
|
2021-03-24 18:26:54 +00:00 |
|
fastp
|
modify fastp tests (#367)
|
2021-03-24 17:08:59 +01:00 |
|
fastqc
|
Use a config containing all test data for module tests (#365)
|
2021-03-24 13:07:37 +00:00 |
|
fgbio
|
New modules: Fgbio callmolecularconsensusreads and sortbam (#352)
|
2021-03-28 20:38:50 +01:00 |
|
flash
|
Re-organise all test data (#354)
|
2021-03-24 09:53:41 +00:00 |
|
gatk4
|
gatk4 markduplicates (#356)
|
2021-03-26 23:25:40 +00:00 |
|
gffread
|
Fixing a bunch of module tests (#370)
|
2021-03-24 17:36:29 +00:00 |
|
gunzip
|
Update test data paths. (#375)
|
2021-03-24 18:18:01 +00:00 |
|
hisat2
|
Add tests for hisat2 (#366)
|
2021-03-25 21:08:46 +00:00 |
|
homer/annotatepeaks
|
Fixing a bunch of module tests (#370)
|
2021-03-24 17:36:29 +00:00 |
|
ivar
|
Update test data paths. (#375)
|
2021-03-24 18:18:01 +00:00 |
|
kallisto/index
|
Add module kallisto/index (#357)
|
2021-03-24 12:25:39 +00:00 |
|
kraken2/run
|
Fix some module tests after switching to config data (#386)
|
2021-03-24 18:28:07 +00:00 |
|
methyldackel
|
Re-organise all test data (#354)
|
2021-03-24 09:53:41 +00:00 |
|
minia
|
Fixing a bunch of module tests (#370)
|
2021-03-24 17:36:29 +00:00 |
|
minimap2/align
|
Re-organise all test data (#354)
|
2021-03-24 09:53:41 +00:00 |
|
mosdepth
|
Re-organise all test data (#354)
|
2021-03-24 09:53:41 +00:00 |
|
msisensor
|
Add module: nf-core hackathon #207 : new module: msisensor/msi (#343)
|
2021-03-25 16:46:00 -04:00 |
|
multiqc
|
Fix some module test after adapting test config approach (#379)
|
2021-03-24 18:29:41 +00:00 |
|
optitype
|
Re-organise all test data (#354)
|
2021-03-24 09:53:41 +00:00 |
|
pangolin
|
Re-organise all test data (#354)
|
2021-03-24 09:53:41 +00:00 |
|
picard
|
Fix a bunch of failing tests after switching to test config (#378)
|
2021-03-24 18:28:54 +00:00 |
|
preseq/lcextrap
|
Re-organise all test data (#354)
|
2021-03-24 09:53:41 +00:00 |
|
prodigal
|
Update test data paths. (#375)
|
2021-03-24 18:18:01 +00:00 |
|
prokka
|
Update test data paths. (#375)
|
2021-03-24 18:18:01 +00:00 |
|
qualimap/bamqc
|
Re-organise all test data (#354)
|
2021-03-24 09:53:41 +00:00 |
|
quast
|
Re-organise all test data (#354)
|
2021-03-24 09:53:41 +00:00 |
|
salmon
|
Fix the test path salmon/index and quant after switching to config data (#385)
|
2021-03-25 17:03:25 +00:00 |
|
samtools
|
Update samtools modules with config logic (#381)
|
2021-03-24 18:15:30 +00:00 |
|
seacr/callpeak
|
Re-organise all test data (#354)
|
2021-03-24 09:53:41 +00:00 |
|
seqkit/split2
|
Seqkit/split2 test path update (#372)
|
2021-03-24 17:05:43 +01:00 |
|
sequenzautils
|
PR for sequenzautils/bam2seqz (#395)
|
2021-04-01 07:08:27 +02:00 |
|
seqwish/induce
|
Fixing a bunch of module tests (#370)
|
2021-03-24 17:36:29 +00:00 |
|
shovill
|
Re-organise all test data (#354)
|
2021-03-24 09:53:41 +00:00 |
|
spades
|
Re-organise all test data (#354)
|
2021-03-24 09:53:41 +00:00 |
|
star
|
Re-organise all test data (#354)
|
2021-03-24 09:53:41 +00:00 |
|
strelka/germline
|
Re-organise all test data (#354)
|
2021-03-24 09:53:41 +00:00 |
|
stringtie
|
Re-organise all test data (#354)
|
2021-03-24 09:53:41 +00:00 |
|
tabix
|
Re-organise all test data (#354)
|
2021-03-24 09:53:41 +00:00 |
|
tiddit/sv
|
Re-organise all test data (#354)
|
2021-03-24 09:53:41 +00:00 |
|
trimgalore
|
Fix a bunch of failing tests after switching to test config (#378)
|
2021-03-24 18:28:54 +00:00 |
|
ucsc
|
Re-organise all test data (#354)
|
2021-03-24 09:53:41 +00:00 |
|
unicycler
|
Re-organise all test data (#354)
|
2021-03-24 09:53:41 +00:00 |
|
untar
|
Fix some module tests after switching to config data (#386)
|
2021-03-24 18:28:07 +00:00 |
|
vcftools
|
Fixing vcftools and bismark tests (#383)
|
2021-03-25 09:12:08 +00:00 |
|
yara
|
Add YARA module (#353)
|
2021-03-24 17:14:52 +01:00 |
c5c59d44a1