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3aacd46da2
* backfilled modules with meta.yml that had no license identifier * harmonized BSD license names * whitespace linting at modules/unzip/meta.yml:12 * harmonized software from US NIH-NCBI/NIST to 'US-Government-Work' * Update modules/bcftools/index/meta.yml `bcftools` is dual-licensed, use associative array to allow for multiple licenses Co-authored-by: Michael L Heuer <heuermh@acm.org> Co-authored-by: Michael L Heuer <heuermh@acm.org>
37 lines
1,010 B
YAML
37 lines
1,010 B
YAML
name: stringtie_merge
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description: Merges the annotation gtf file and the stringtie output gtf files
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keywords:
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- merge
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- gtf
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- reference
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tools:
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- stringtie2:
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description: |
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Transcript assembly and quantification for RNA-Seq
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homepage: https://ccb.jhu.edu/software/stringtie/index.shtml
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documentation: https://ccb.jhu.edu/software/stringtie/index.shtml?t=manual
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licence: ['MIT']
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input:
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- stringtie_gtf:
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type: file
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description: |
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Stringtie transcript gtf output(s).
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pattern: "*.gtf"
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- annotation_gtf:
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type: file
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description: |
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Annotation gtf file.
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pattern: "*.gtf"
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output:
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- merged_gtf:
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type: map
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description: |
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Merged gtf from annotation and stringtie output gtfs.
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pattern: "*.gtf"
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- versions:
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type: file
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description: File containing software versions
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pattern: "versions.yml"
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authors:
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- "@yuukiiwa"
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