nf-core_modules/tests/modules/bowtie2/align/nextflow.config

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params {
force_large_index = false
}
process {
publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" }
}
if (params.force_large_index) {
process {
withName: BOWTIE2_BUILD {
ext.args = '--large-index'
}
}
}