mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-10 20:23:10 +00:00
33 lines
710 B
Text
33 lines
710 B
Text
params {
|
|
outdir = "output/"
|
|
publish_dir_mode = "copy"
|
|
enable_conda = false
|
|
singularity_pull_docker_container = false
|
|
}
|
|
|
|
process {
|
|
cpus = 2
|
|
memory = 3.GB
|
|
time = 2.h
|
|
}
|
|
|
|
if ("$PROFILE" == "singularity") {
|
|
singularity.enabled = true
|
|
singularity.autoMounts = true
|
|
} else if ("$PROFILE" == "conda") {
|
|
params.enable_conda = true
|
|
} else {
|
|
docker.enabled = true
|
|
docker.userEmulation = true
|
|
docker.runOptions = "--platform linux/x86_64"
|
|
}
|
|
|
|
// Increase time available to build Conda environment
|
|
conda { createTimeout = "120 min" }
|
|
|
|
// Load test_data.config containing paths to test data
|
|
includeConfig 'test_data.config'
|
|
|
|
manifest {
|
|
nextflowVersion = '!>=21.10.0'
|
|
}
|