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nf-core_modules/tests/software/gatk4
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Edmund Miller a3684d9594
Lint modules ci (#389) 
* ci: Add modules lint step

Moved it ahead of the nextflow install so ideally it'll fail before we
bother doing any more setup

* ci: _ => /

* Update tests/config/pytest_software.yml

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
2021-04-08 09:10:52 +01:00
..
applybqsr Lint modules ci (#389) 2021-04-08 09:10:52 +01:00
baserecalibrator Lint modules ci (#389) 2021-04-08 09:10:52 +01:00
bedtointervallist Lint modules ci (#389) 2021-04-08 09:10:52 +01:00
createsequencedictionary modify test path - module gatk4 + added new module gatk4/haplotypecaller (#382) 2021-03-26 12:46:46 +01:00
fastqtosam Lint modules ci (#389) 2021-04-08 09:10:52 +01:00
haplotypecaller modify test path - module gatk4 + added new module gatk4/haplotypecaller (#382) 2021-03-26 12:46:46 +01:00
markduplicates gatk4 markduplicates (#356) 2021-03-26 23:25:40 +00:00
mergebamalignment Lint modules ci (#389) 2021-04-08 09:10:52 +01:00
mergevcfs Lint modules ci (#389) 2021-04-08 09:10:52 +01:00
revertsam Lint modules ci (#389) 2021-04-08 09:10:52 +01:00
samtofastq Lint modules ci (#389) 2021-04-08 09:10:52 +01:00
splitncigarreads Lint modules ci (#389) 2021-04-08 09:10:52 +01:00
variantfiltration Lint modules ci (#389) 2021-04-08 09:10:52 +01:00